{ "_id": "6a1eaf9bb25058d4daadb41c", "Package": "climniche", "Type": "Package", "Title": "Niche Climate Exposure", "Version": "0.2.0", "Authors@R": "c(\nperson(\"Bohao\", \"He\", role = c(\"aut\", \"cre\"), email = \"bohao.he@polimi.it\")\n)", "Description": "Assesses niche climate exposure by interpreting projected\nclimate change relative to the climate conditions a species\ncurrently occupies. Using occurrence records, range data,\ncontinuous species distribution model suitability maps, current\nenvironmental rasters and future projections, the package\nseparates Climatic Displacement, Niche Distance Shift, Climatic\nReconfiguration and Niche Boundary Exceedance.", "License": "GPL (>= 3)", "URL": "https://github.com/Bohao0813/climniche,\nhttps://bohao0813.github.io/climniche/", "BugReports": "https://github.com/Bohao0813/climniche/issues", "Encoding": "UTF-8", "Roxygen": "list(markdown = TRUE)", "VignetteBuilder": "knitr", "Config/roxygen2/version": "8.0.0", "Repository": "https://bohao0813.r-universe.dev", "Date/Publication": "2026-06-02 07:07:35 UTC", "RemoteUrl": "https://github.com/bohao0813/climniche", "RemoteRef": "HEAD", "RemoteSha": "3a1f85c00333c68b1800d8a30c9bb77d5bcc18b6", "NeedsCompilation": "no", "Packaged": { "Date": "2026-06-02 10:22:09 UTC", "User": "root" }, "Author": "Bohao He [aut, cre]", "Maintainer": "Bohao He ", "MD5sum": "28128170d2044ba8980e905a7064fb11", "_user": "bohao0813", "_type": "src", "_file": "climniche_0.2.0.tar.gz", "_fileid": "0a2352459d16fcc3e2689bf333d425c8feb16d20c8ef74f7f12902d0e2ea4a80", "_filesize": 16848171, "_sha256": "0a2352459d16fcc3e2689bf333d425c8feb16d20c8ef74f7f12902d0e2ea4a80", "_created": "2026-06-02T10:22:09.000Z", "_published": "2026-06-02T10:25:31.094Z", "_distro": "noble", "_jobs": [ { "job": 79049740544, "time": 134, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7355143799" }, { "job": 79049740482, "time": 125, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7355140989" }, { "job": 79049740493, "time": 119, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "7355144548" }, { "job": 79049740471, "time": 91, "config": "macos-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7355132856" }, { "job": 79049289507, "time": 166, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7355099441" }, { "job": 79049740481, "time": 104, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7355133964" }, { "job": 79049740580, "time": 142, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "7355146277" }, { "job": 79049740502, "time": 87, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "7355128791" }, { "job": 79049740592, "time": 81, "config": "windows-release", "r": "4.6.0", "check": "OK", "artifact": "7355126724" } ], "_buildurl": "https://github.com/r-universe/bohao0813/actions/runs/26813484443", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/bohao0813/climniche", "_commit": { "id": "3a1f85c00333c68b1800d8a30c9bb77d5bcc18b6", "author": "Bohao He ", "committer": "Bohao He ", "message": "Clarify fit thresholds and metric formulas\n", "time": 1780384055 }, "_maintainer": { "name": "Bohao He", "email": "bohao.he@polimi.it", "login": "bohao0813", "description": "PhD student at Polytechnic University of Milan (Italy).", "uuid": 162645819 }, "_registered": true, "_dependencies": [ { "package": "grid", "role": "Imports" }, { "package": "methods", "role": "Imports" }, { "package": "ggplot2", "role": "Suggests" }, { "package": "knitr", "role": "Suggests" }, { "package": "patchwork", "role": "Suggests" }, { "package": "raster", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "terra", "role": "Suggests" } ], "_owner": "bohao0813", "_selfowned": true, "_usedby": 0, "_updates": [ { "week": "2026-22", "n": 6 }, { "week": "2026-23", "n": 3 } ], "_tags": [], "_topics": [ "climate-change", "conservation", "ecology", "niche-modeling", "species-distribution-models" ], "_stars": 1, "_contributors": [ { "user": "bohao0813", "count": 9, "uuid": 162645819 } ], "_userbio": { "uuid": 162645819, "type": "user", "name": "Bohao He", "description": "PhD student at Polytechnic University of Milan (Italy)." }, "_downloads": { "count": 32, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/climniche" }, "_devurl": "https://github.com/bohao0813/climniche", "_pkgdown": "https://bohao0813.github.io/climniche/", "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/climniche.html", "extra/contents.json", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "manual.pdf" ], "_homeurl": "https://github.com/bohao0813/climniche", "_realowner": "bohao0813", "_cranurl": true, "_releases": [ { "version": "0.0.1", "date": "2026-05-29" } ], "_exports": [ "boundary_exceedance", "climniche_diagram_data", "climniche_report", "climniche_showcase_data", "climniche_summary", "climniche_table", "fit_climniche", "fit_climniche_raster", "fit_climniche_terra", "niche_metric", "niche_percentile", "niche_potential", "niche_radius", "plot_climniche_class_summary", "plot_climniche_classes", "plot_climniche_diagram", "plot_climniche_distribution", "plot_climniche_exposure", "plot_climniche_map", "plot_climniche_report", "plot_climniche_showcase", "plot_climniche_variable_contribution", "plot_variable_contribution", "simulate_climniche", "variable_contribution", "write_climniche_report" ], "_help": [ { "page": "boundary_exceedance", "title": "Niche Boundary Exceedance", "topics": [ "boundary_exceedance" ] }, { "page": "climniche_diagram_data", "title": "Build data for a niche climate exposure diagram", "topics": [ "climniche_diagram_data" ] }, { "page": "climniche_report", "title": "Build a climniche report", "topics": [ "climniche_report" ] }, { "page": "climniche_showcase_data", "title": "Build data for the climniche summary figure", "topics": [ "climniche_showcase_data" ] }, { "page": "climniche_summary", "title": "Summarise climniche results", "topics": [ "climniche_summary" ] }, { "page": "climniche_table", "title": "Extract a tidy climniche table", "topics": [ "climniche_table" ] }, { "page": "fit_climniche", "title": "Fit niche climate exposure", "topics": [ "fit_climniche" ] }, { "page": "fit_climniche_raster", "title": "Fit climniche to raster data", "topics": [ "fit_climniche_raster" ] }, { "page": "fit_climniche_terra", "title": "Fit climniche to terra raster data", "topics": [ "fit_climniche_terra" ] }, { "page": "niche_metric", "title": "Build a sensitivity weighted niche metric", "topics": [ "niche_metric" ] }, { "page": "niche_percentile", "title": "Niche percentile shift", "topics": [ "niche_percentile" ] }, { "page": "niche_potential", "title": "Niche potential", "topics": [ "niche_potential" ] }, { "page": "niche_radius", "title": "Niche radius", "topics": [ "niche_radius" ] }, { "page": "plot_climniche_class_summary", "title": "Plot climniche class proportions", "topics": [ "plot_climniche_class_summary" ] }, { "page": "plot_climniche_classes", "title": "Plot climniche classes", "topics": [ "plot_climniche_classes" ] }, { "page": "plot_climniche_diagram", "title": "Plot a niche climate exposure diagram", "topics": [ "plot_climniche_diagram" ] }, { "page": "plot_climniche_distribution", "title": "Plot a climniche metric distribution", "topics": [ "plot_climniche_distribution" ] }, { "page": "plot_climniche_exposure", "title": "Plot the climniche exposure plane", "topics": [ "plot_climniche_exposure" ] }, { "page": "plot_climniche_map", "title": "Plot a climniche map", "topics": [ "plot_climniche_map" ] }, { "page": "plot_climniche_report", "title": "Plot a climniche report figure", "topics": [ "plot_climniche_report" ] }, { "page": "plot_climniche_showcase", "title": "Plot the climniche summary figure", "topics": [ "plot_climniche_showcase" ] }, { "page": "plot_climniche_variable_contribution", "title": "Plot mean variable contribution", "topics": [ "plot_climniche_variable_contribution" ] }, { "page": "plot_variable_contribution", "title": "Plot mean variable contribution", "topics": [ "plot_variable_contribution" ] }, { "page": "simulate_climniche", "title": "Simulate a minimal climate niche change experiment", "topics": [ "simulate_climniche" ] }, { "page": "variable_contribution", "title": "Variable contribution to change in niche potential", "topics": [ "variable_contribution" ] }, { "page": "write_climniche_report", "title": "Write a climniche report to Markdown", "topics": [ "write_climniche_report" ] } ], "_readme": "https://github.com/bohao0813/climniche/raw/HEAD/README.md", "_rundeps": [], "_vignettes": [ { "source": "climniche-examples.Rmd", "filename": "climniche-examples.html", "title": "Examples", "engine": "knitr::rmarkdown", "headings": [ "Mediterranean maps", "Summary figure", "Fitting the same data structure" ], "created": "2026-05-26 08:45:09", "modified": "2026-06-01 09:44:46", "commits": 3 } ], "_score": 4, "_indexed": true, "_nocasepkg": "climniche", "_universes": [ "bohao0813" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.2.0", "date": "2026-06-02T10:24:23.000Z", "distro": "noble", "commit": "3a1f85c00333c68b1800d8a30c9bb77d5bcc18b6", "fileid": "3b5dc4815344bed87699a9883e6c8357535b8de6397234c9d62212f1cf7319d0", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bohao0813/actions/runs/26813484443" }, { "r": "4.6.0", "os": "linux", "version": "0.2.0", "date": "2026-06-02T10:24:16.000Z", "distro": "noble", "commit": "3a1f85c00333c68b1800d8a30c9bb77d5bcc18b6", "fileid": "1ff5a4dbf3c8ae3e2bbde9aaa653302d0da3c479dc7323c05b177504d7d66a33", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bohao0813/actions/runs/26813484443" }, { "r": "4.5.3", "os": "mac", "version": "0.2.0", "date": "2026-06-02T10:24:26.000Z", "commit": "3a1f85c00333c68b1800d8a30c9bb77d5bcc18b6", "fileid": "6a06793cc7c6cf4f00f0ea445e4a701b9636808df783d034f42b7372bb29387d", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bohao0813/actions/runs/26813484443" }, { "r": "4.6.0", "os": "mac", "version": "0.2.0", "date": "2026-06-02T10:23:57.000Z", "commit": "3a1f85c00333c68b1800d8a30c9bb77d5bcc18b6", "fileid": "d78d15e7422d03c178d53c37dd4c11c284bad69e749ae0e2ab7bdfc84f04fd22", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bohao0813/actions/runs/26813484443" }, { "r": "4.6.0", "os": "wasm", "version": "0.2.0", "date": "2026-06-02T10:24:16.000Z", "commit": "3a1f85c00333c68b1800d8a30c9bb77d5bcc18b6", "fileid": "fa6fa033da1414347be636c377d9f3084713fbdd28b09ca91cb80f76475792c4", "status": "success", "buildurl": "https://github.com/r-universe/bohao0813/actions/runs/26813484443" }, { "r": "4.7.0", "os": "win", "version": "0.2.0", "date": "2026-06-02T10:24:20.000Z", "commit": "3a1f85c00333c68b1800d8a30c9bb77d5bcc18b6", "fileid": "5e05d23c14abd7bf896bd7bcddbbf838ed65e1ae81e25f7cb293cdc5d489bd57", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bohao0813/actions/runs/26813484443" }, { "r": "4.5.3", "os": "win", "version": "0.2.0", "date": "2026-06-02T10:23:29.000Z", "commit": "3a1f85c00333c68b1800d8a30c9bb77d5bcc18b6", "fileid": "9265d27e7f611574780530c8413c3b749bea2ef4bb9ea3c3501d0e6e5c36c4c3", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bohao0813/actions/runs/26813484443" }, { "r": "4.6.0", "os": "win", "version": "0.2.0", "date": "2026-06-02T10:23:26.000Z", "commit": "3a1f85c00333c68b1800d8a30c9bb77d5bcc18b6", "fileid": "23864040c55220ffc0ea507291a126c360c75de5e8d0ce1799568d43eeb0cba9", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bohao0813/actions/runs/26813484443" } ] }